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IDSAM23877_1312 TypeCDS
From1341449 nt length1017
To1342465 aa length338
Gene pI10.77
Definitionputative transcriptional regulator M.W (Da) 36022
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_67 putative regulatory protein1112.0e-28
coelSCO5017 putative regulatory protein1374.0e-38
sgrSGR_6816 putative AraC-family transcriptional regulator1183.0e-31

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AraC_binding_21AraC-binding-like domain19-19586.81.2e-24

HTH_181Helix-turn-helix domain236-31582.02.4e-23

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family283-31545.64.7e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053127617.1 helix-turn-helix domain-containing protein [Streptomyces amb... 13132.5e-180
WP_063481468.1 helix-turn-helix domain-containing protein [Streptomyces amb... 12915.4e-177
WP_148836820.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6976.5e-87
WP_189286226.1 helix-turn-helix domain-containing protein [Streptomyces fum... 6881.1e-85
WP_093472138.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 6811.7e-84
WP_053191726.1 helix-turn-helix domain-containing protein [Streptomyces res... 6751.0e-83
WP_031100477.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 6741.2e-83
6751.2e-83
WP_081952275.1 helix-turn-helix domain-containing protein [Kitasatospora ph... 6761.4e-83
WP_030990273.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6704.9e-83

PSORT result

LocalizationCertaintyPSORT said
Not Clear