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IDSAM23877_1330 TypeCDS
From1356499 nt length861
To1357359 aa length286
Gene pI6.35
Definitionputative DNA-binding protein M.W (Da) 31082
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7096 putative DNA-binding protein4525.0e-163
coelSCO1242 putative DNA-binding protein5230.0e+00
sgrSGR_6285 putative DNA-binding protein3709.0e-131

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain12-7358.65.2e-16

HTH_31Helix-turn-helix16-6629.94e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053127647.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14530.0e+00
WP_055420737.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14090.0e+00
WP_121750303.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14070.0e+00
WP_210959668.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14010.0e+00
WP_217169602.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13830.0e+00
MYS52357.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID6... 13770.0e+00
WP_061445995.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13720.0e+00
WP_164418835.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13700.0e+00
WP_102928411.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13690.0e+00
WP_225634995.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13690.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear