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IDSAM23877_2058 TypeCDS
From2135995 nt length861
To2135135 aa length286
Gene pI6.82
DefinitionDNA-binding protein M.W (Da) 32356
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6253 putative DNA-binding protein5310.0e+00
coelSCO1979 putative DNA-binding protein5630.0e+00
sgrSGR_1055 putative DNA-binding protein4645.0e-168

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-7538.31.1e-09

HTH_31Helix-turn-helix21-6930.23.1e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053129033.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14810.0e+00
WP_122615049.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14610.0e+00
WP_055416388.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14550.0e+00
MZE72362.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 14550.0e+00
WP_054103402.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14550.0e+00
WP_059300260.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14540.0e+00
WP_030185875.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14530.0e+00
WP_219178103.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14530.0e+00
WP_007448400.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14530.0e+00
WP_203602817.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14520.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear