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IDSAM23877_2083 TypeCDS
From2157507 nt length2682
To2160188 aa length893
Gene pI9.08
DefinitionATP-dependent helicase HrpB M.W (Da) 93932
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6231 putative ATP-dependent RNA helicase11530.0e+00
coelSCO2000 putative ATP-binding RNA helicase11900.0e+00
sgrSGR_5532 putative ATP-dependent RNA helicase10770.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HrpB_C1ATP-dependent helicase C-terminal746-878165.56.9e-49

HA21Helicase associated domain (HA2)413-47838.51e-09

Helicase_C1Helicase conserved C-terminal domain236-35037.81.8e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ55132.1 ATP-dependent helicase HrpB [Streptomyces ambofaciens ATCC 23877] 30810.0e+00
WP_053129097.1 ATP-dependent RNA helicase [Streptomyces ambofaciens] 30190.0e+00
WP_063481795.1 ATP-dependent helicase HrpB [Streptomyces ambofaciens] >gb 29850.0e+00
WP_189589777.1 ATP-dependent helicase HrpB [Streptomyces massasporeus] >dbj... 25200.0e+00
WP_058925941.1 ATP-dependent helicase HrpB [Streptomyces sp. CdTB01] >gb 25080.0e+00
WP_165997503.1 ATP-dependent helicase HrpB [Streptomyces sp. JB150] >gb 24990.0e+00
WP_067313382.1 ATP-dependent helicase HrpB [Streptomyces griseochromogenes]... 24860.0e+00
WP_097216020.1 ATP-dependent helicase HrpB [Streptomyces sp. Ag82_G6-1] >em... 24790.0e+00
WP_031132170.1 MULTISPECIES: ATP-dependent helicase HrpB [Streptomyces] >gb... 24760.0e+00
24760.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear