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IDSAM23877_2151 TypeCDS
From2238329 nt length3540
To2234790 aa length1179
GenednaE pI5.77
DefinitionDNA polymerase III subunit alpha M.W (Da) 130892
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6143 putative DNA polymerase III alpha subunit23100.0e+00
coelSCO2064 putative DNA polymerase III alpha chain24220.0e+00
sgrSGR_5440 putative DNA polymerase III alpha subunit22040.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_alpha1Bacterial DNA polymerase III alpha subunit316-756542.46e-163

PHP1PHP domain8-194147.83.1e-43

HHH_61Helix-hairpin-helix motif829-91780.86e-23

tRNA_anti-codon1OB-fold nucleic acid binding domain1020-109229.26e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053129286.1 DNA polymerase III subunit alpha [Streptomyces ambofaciens] ... 62550.0e+00
WP_063481827.1 DNA polymerase III subunit alpha [Streptomyces ambofaciens] ... 62530.0e+00
WP_176155498.1 DNA polymerase III subunit alpha [Streptomyces sp. NA03103] ... 62050.0e+00
WP_030191923.1 DNA polymerase III subunit alpha [Streptomyces violaceorubid... 62050.0e+00
WP_076973891.1 DNA polymerase III subunit alpha [Streptomyces sp. M1013] >g... 62050.0e+00
WP_102928439.1 MULTISPECIES: DNA polymerase III subunit alpha [Streptomyces... 62040.0e+00
WP_003976751.1 MULTISPECIES: DNA polymerase III subunit alpha [Streptomyces... 62030.0e+00
WP_121709623.1 DNA polymerase III subunit alpha [Streptomyces sp. E5N91] 62000.0e+00
WP_133888440.1 DNA polymerase III subunit alpha [Streptomyces sp. BK208] >l... 61980.0e+00
WP_193486185.1 DNA polymerase III subunit alpha [Streptomyces anthocyanicus... 61970.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear