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IDSAM23877_2166 TypeCDS
From2251749 nt length834
To2250916 aa length277
Gene pI10.39
DefinitionDNA-binding protein M.W (Da) 28393
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6131 putative DNA-binding protein3171.0e-108
coelSCO2075 putative DNA-binding protein3672.0e-130
sgrSGR_5430 putative DNA-binding protein2191.0e-71

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

zf-dskA_traR1Prokaryotic dksA/traR C4-type zinc finger240-27547.41.2e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053129332.1 TraR/DksA C4-type zinc finger protein [Streptomyces ambofaci... 5781.1e-70
WP_063481831.1 TraR/DksA C4-type zinc finger protein [Streptomyces ambofaci... 5579.1e-68
WP_043373984.1 TraR/DksA C4-type zinc finger protein [Streptomyces mutabili... 5498.6e-67
WP_104635809.1 TraR/DksA C4-type zinc finger protein [Streptomyces sp. MH60... 5436.5e-66
WP_031083702.1 MULTISPECIES: TraR/DksA C4-type zinc finger protein [unclass... 5402.6e-65
WP_191888011.1 TraR/DksA family transcriptional regulator [Streptomyces mut... 5383.9e-65
WP_217252873.1 TraR/DksA C4-type zinc finger protein [Streptomyces sp. AC60... 5384.3e-65
WP_161327803.1 TraR/DksA family transcriptional regulator [Streptomyces sp.... 5376.2e-65
WP_031035865.1 TraR/DksA C4-type zinc finger protein [Streptomyces sp. NRRL... 5396.6e-65
WP_226487066.1 TraR/DksA family transcriptional regulator [Streptomyces par... 5397.0e-65

PSORT result

LocalizationCertaintyPSORT said
Not Clear