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IDSAM23877_2444 TypeCDS
From2547427 nt length681
To2548107 aa length226
GenetcmR pI4.96
DefinitionHTH-type transcriptional regulator TcmR M.W (Da) 25264
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5796 putative TetR-family transcriptional regulator2933.0e-102
coelSCO2374 putative transcriptional regulator3515.0e-125
sgrSGR_5127 putative TetR-family transcriptional regulator2597.0e-89

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TetR_N1Bacterial regulatory proteins, tetR family24-6561.63.9e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ55493.1 HTH-type transcriptional regulator TcmR [Streptomyces ambofaciens... 9133.9e-123
WP_053130155.1 TetR family transcriptional regulator [Streptomyces ambofaci... 8994.4e-121
WP_210958582.1 TetR family transcriptional regulator [Streptomyces sp. b94]... 7661.1e-100
WP_121747339.1 TetR family transcriptional regulator [Streptomyces sp. E2N1... 7539.8e-99
KFG75738.1 TetR family transcriptional regulator [Streptomyces mutabilis] 7331.1e-95
WP_055416721.1 TetR family transcriptional regulator [Streptomyces pactum] ... 7302.9e-95
WP_217142638.1 TetR family transcriptional regulator [Streptomyces sp. AC62... 7286.3e-95
GGP98709.1 TetR family transcriptional regulator [Streptomyces mutabilis] 7276.7e-95
WP_219177436.1 TetR family transcriptional regulator [Streptomyces sp. AC54... 7277.3e-95
WP_167343765.1 TetR family transcriptional regulator [Streptomyces mutabili... 7251.5e-94

PSORT result

LocalizationCertaintyPSORT said
Not Clear