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IDSAM23877_2615 TypeCDS
From2740595 nt length1041
To2739555 aa length346
Gene pI10.72
Definitionputative DNA-binding protein M.W (Da) 34873
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5491 putative exogenous DNA-binding protein3181.0e-107
coelSCO2568 putative DNA-binding protein3693.0e-128
sgrSGR_4976 putative DNA-binding protein1972.0e-61

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HHH_31Helix-hairpin-helix motif285-34571.64.2e-20

HHH1Helix-hairpin-helix motif287-31339.03.7e-10

SLBB1SLBB domain187-23936.33.3e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ55664.1 putative DNA-binding protein [Streptomyces ambofaciens ATCC 23877... 8707.7e-113
WP_107291860.1 ComEA family DNA-binding protein [Streptomyces ambofaciens] 8573.5e-110
ANB06361.1 DNA-binding protein [Streptomyces ambofaciens] 8564.8e-110
WP_107408654.1 ComEA family DNA-binding protein [Streptomyces ambofaciens] 8558.0e-110
OSC57269.1 DNA-binding protein [Streptomyces sp. 4F] 6381.0e-78
WP_219177174.1 helix-hairpin-helix domain-containing protein [Streptomyces ... 6429.4e-78
WP_209440563.1 ComEA family DNA-binding protein [Streptomyces mutabilis] >g... 6242.8e-75
WP_100049149.1 ComEA family DNA-binding protein [Streptomyces sp. Alain-F2R... 6243.5e-75
WP_109202981.1 helix-hairpin-helix domain-containing protein [Streptomyces ... 6123.8e-75
RSS71436.1 DNA-binding protein [Streptomyces sp. WAC06273] >gb 6124.1e-75

PSORT result

LocalizationCertaintyPSORT said
Not Clear