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IDSAM23877_2768 TypeCDS
From2921334 nt length1050
To2920285 aa length349
Gene pI6.09
DefinitionSigma-70 family RNA polymerase sigma factor M.W (Da) 37325
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2742 putative sigma factor4493.0e-160

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4161-21247.21.2e-12

Sigma70_r21Sigma-70 region 266-12946.42.2e-12

Sigma70_r41Sigma-70, region 4166-21231.49.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ55817.1 Sigma-70 family RNA polymerase sigma factor [Streptomyces ambofac... 12744.0e-174
WP_079030179.1 RNA polymerase sigma-70 factor [Streptomyces ambofaciens] 12683.5e-173
WP_063484421.1 RNA polymerase sigma-70 factor [Streptomyces ambofaciens] >g... 12308.6e-168
WP_100045948.1 RNA polymerase sigma-70 factor [Streptomyces sp. Alain-F2R5]... 10651.1e-142
PAK24963.1 RNA polymerase subunit sigma-24 [Streptomyces sp. alain-838] 10632.5e-142
WP_217142738.1 RNA polymerase sigma-70 factor [Streptomyces sp. AC627_RSS90... 10565.0e-141
GGQ64953.1 RNA polymerase sigma24 factor [Streptomyces pilosus] 10421.5e-139
WP_189555931.1 RNA polymerase sigma-70 factor [Streptomyces pilosus] 10431.6e-139
WP_055417735.1 RNA polymerase sigma-70 factor [Streptomyces pactum] 10413.9e-139
AQS69511.1 RNA polymerase subunit sigma-24 [Streptomyces pactum] 10415.8e-139

PSORT result

LocalizationCertaintyPSORT said
Not Clear