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IDSAM23877_2772 TypeCDS
From2924850 nt length1956
To2926805 aa length651
Gene pI6.82
DefinitionRibose ABC transport system%2C permease protein RbsC M.W (Da) 65968
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5318 putative D-ribose ABC transporter substrate-binding protein/permease protein10310.0e+00
coelSCO2747 bifunctional carbohydrate binding and transport protein11540.0e+00
sgrSGR_1095 putative D-ribose ABC transporter substrate-binding/permease protein9350.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_41Periplasmic binding protein domain376-628224.02.1e-66

BPD_transp_21Branched-chain amino acid transport system / permease component52-315158.61.5e-46

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family374-63988.83.6e-25

Peripla_BP_31Periplasmic binding protein-like domain497-64252.46.5e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053131188.1 substrate-binding domain-containing protein [Streptomyces am... 27780.0e+00
WP_063482097.1 substrate-binding domain-containing protein [Streptomyces am... 27780.0e+00
WP_219176951.1 substrate-binding domain-containing protein [Streptomyces sp... 26970.0e+00
WP_100045952.1 substrate-binding domain-containing protein [Streptomyces sp... 26870.0e+00
OSC58098.1 transporter [Streptomyces sp. 4F] 26840.0e+00
WP_122620005.1 substrate-binding domain-containing protein [Streptomyces sp... 26830.0e+00
WP_043372765.1 substrate-binding domain-containing protein [Streptomyces mu... 26720.0e+00
WP_191884215.1 substrate-binding domain-containing protein [Streptomyces mu... 26670.0e+00
PAK21983.1 transporter [Streptomyces sp. alain-838] 26670.0e+00
WP_073723240.1 substrate-binding domain-containing protein [Streptomyces sp... 26670.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear