-- | --

IDSAM23877_2774 TypeCDS
From2927835 nt length390
To2928224 aa length129
GenerbsD pI6.25
DefinitionD-ribose pyranase M.W (Da) 13368
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5316 putative D-ribose ABC transporter permease protein1873.0e-63
coelSCO2749 carbohydrate transport protein2161.0e-74
sgrSGR_1093 putative D-ribose ABC transporter auxiliary component2044.0e-70

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RbsD_FucU1RbsD / FucU transport protein family1-127134.03.8e-39

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053131194.1 D-ribose pyranase [Streptomyces ambofaciens] >gb 4282.1e-52
WP_061923508.1 D-ribose pyranase [Streptomyces bungoensis] >gb 4203.8e-51
WP_097254512.1 D-ribose pyranase [Streptomyces sp. Ag109_G2-15] >emb 4161.6e-50
WP_020940196.1 D-ribose pyranase [Streptomyces collinus] >gb 4142.6e-50
WP_217143952.1 D-ribose pyranase [Streptomyces sp. AC627_RSS907] 4117.5e-50
WP_122620003.1 D-ribose pyranase [Streptomyces sp. Tu 4128] 4119.1e-50
4119.5e-50
WP_121788691.1 D-ribose pyranase [Streptomyces sp. Z022] >gb 4119.6e-50
WP_143639713.1 D-ribose pyranase [Streptomyces sp. 1-11] >dbj 4119.7e-50
WP_150502462.1 D-ribose pyranase [Streptomyces chartreusis] >gb 4101.1e-49

PSORT result

LocalizationCertaintyPSORT said
Not Clear