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IDSAM23877_2817 TypeCDS
From2981978 nt length1443
To2983420 aa length480
GenedesA pI5.03
Definitionputative L-Lysine decarboxylase M.W (Da) 52237
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5272 lysine decarboxylase8910.0e+00
coelSCO2782 lysine decarboxylase9280.0e+00
sgrSGR_4750 putative pyridoxal-dependent decarboxylase8070.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pyridoxal_deC1Pyridoxal-dependent decarboxylase conserved domain62-402209.74.8e-62

Aminotran_51Aminotransferase class-V142-26425.74.6e-06

SepSecS1O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS176-31325.35e-06

Beta_elim_lyase1Beta-eliminating lyase139-33525.37.7e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053131311.1 lysine decarboxylase DesA [Streptomyces ambofaciens] >gb 25210.0e+00
WP_063482120.1 lysine decarboxylase DesA [Streptomyces ambofaciens] >gb 25030.0e+00
WP_100047076.1 lysine decarboxylase DesA [Streptomyces sp. Alain-F2R5] >gb 24540.0e+00
WP_121747118.1 lysine decarboxylase DesA [Streptomyces sp. E2N166] 24530.0e+00
WP_121702378.1 MULTISPECIES: lysine decarboxylase DesA [unclassified Strept... 24500.0e+00
WP_219176874.1 aminotransferase class I/II-fold pyridoxal phosphate-depende... 24490.0e+00
WP_108986694.1 lysine decarboxylase DesA [Streptomyces coelicoflavus] >gb 24490.0e+00
OSC72044.1 pyridoxal-dependent decarboxylase [Streptomyces sp. 4F] 24480.0e+00
WP_127434163.1 MULTISPECIES: lysine decarboxylase DesA [unclassified Strept... 24480.0e+00
WP_109202912.1 lysine decarboxylase DesA [Streptomyces sp. CS207] >gb 24460.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear