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IDSAM23877_2970 TypeCDS
From3134357 nt length993
To3135349 aa length330
Gene pI4.59
DefinitionPermease binding-protein component M.W (Da) 35457
Note AseI frg.
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5144 putative ABC transporter substrate-binding protein5050.0e+00
coelSCO2933 putative permease binding-protein component5460.0e+00
sgrSGR_4607 putative ABC transporter solute-binding protein4203.0e-149

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system55-322198.21.6e-58

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ56019.1 Permease binding-protein component [Streptomyces ambofaciens ATCC... 16910.0e+00
WP_063482178.1 glycine betaine ABC transporter substrate-binding protein [S... 16700.0e+00
WP_162492149.1 glycine betaine ABC transporter substrate-binding protein [S... 16140.0e+00
WP_210960727.1 glycine betaine ABC transporter substrate-binding protein [S... 15030.0e+00
WP_121747231.1 glycine betaine ABC transporter substrate-binding protein [S... 15000.0e+00
WP_086876162.1 glycine betaine ABC transporter substrate-binding protein [S... 14890.0e+00
WP_030975266.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 14880.0e+00
WP_031019542.1 glycine betaine ABC transporter substrate-binding protein [S... 14880.0e+00
NEC75317.1 glycine betaine ABC transporter substrate-binding protein [Strept... 14870.0e+00
PAK24012.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 14840.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear