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IDSAM23877_2972 TypeCDS
From3137057 nt length660
To3136398 aa length219
Gene pI6.73
DefinitionTranscriptional regulator M.W (Da) 22965
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5141 putative differentiation regulon (IclR-family transcriptional regulator)3671.0e-131
coelSCO2935 putative transcriptional regulator3965.0e-143
sgrSGR_4602 putative IclR-family transcriptional regulator3678.0e-132

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_IclR1IclR helix-turn-helix domain8-5854.47e-15

Rrf21Transcriptional regulator5-6025.51.1e-05

HTH_111HTH domain14-5023.14.8e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053142457.1 helix-turn-helix domain-containing protein [Streptomyces amb... 8118.2e-108
WP_219176631.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7743.1e-102
WP_121747391.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 7727.6e-102
WP_133885446.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7641.0e-100
WP_073723637.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7603.9e-100
WP_217245794.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7589.4e-100
WP_019325678.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7561.6e-99
WP_043372479.1 helix-turn-helix domain-containing protein [Streptomyces mut... 7501.5e-98
WP_100045660.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7466.0e-98
WP_061444449.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7459.4e-98

PSORT result

LocalizationCertaintyPSORT said
Not Clear