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IDSAM23877_3275 TypeCDS
From3484258 nt length282
To3483977 aa length93
Gene pI4.42
DefinitionDNA-binding helix-turn-helix protein M.W (Da) 10081
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3272 putative DNA binding protein1034.0e-31

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix26-7550.02e-13

HTH_311Helix-turn-helix domain19-7247.51.5e-12

HTH_371Helix-turn-helix domain20-7933.33.2e-08

HTH_191Helix-turn-helix domain21-7531.41.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053132686.1 helix-turn-helix domain-containing protein [Streptomyces amb... 4751.9e-60
AKZ56322.1 DNA-binding helix-turn-helix protein [Streptomyces ambofaciens AT... 4722.9e-60
WP_164251352.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 4518.7e-57
WP_224221506.1 helix-turn-helix domain-containing protein [Streptomyces oli... 4501.0e-56
WP_224293989.1 helix-turn-helix domain-containing protein [Streptomyces oli... 4501.3e-56
WP_200303383.1 helix-turn-helix domain-containing protein [Streptomyces ade... 4482.4e-56
WP_031044488.1 helix-turn-helix domain-containing protein [Streptomyces oli... 4455.7e-56
WP_185007520.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 4456.6e-56
WP_009337797.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 4449.5e-56
WP_189561466.1 helix-turn-helix domain-containing protein [Streptomyces pil... 4441.1e-55

PSORT result

LocalizationCertaintyPSORT said
Not Clear