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IDSAM23877_3468 TypeCDS
From3695064 nt length483
To3694582 aa length160
GenecarD pI5.39
DefinitionRNA polymerase-binding transcription factor CarD M.W (Da) 17829
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3970 putative CarD-like transcriptional regulator3207.0e-115
coelSCO4232 putative transcriptional factor regulator3207.0e-115
sgrSGR_4011 putative CarD-like transcriptional regulator3207.0e-115

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CarD_CdnL_TRCF1CarD-like/TRCF domain3-11058.29.2e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003953493.1 MULTISPECIES: CarD family transcriptional regulator [Actinom... 8195.3e-111
WP_030906640.1 CarD family transcriptional regulator [Streptomyces sp. NRRL... 8161.3e-110
WP_128432156.1 CarD family transcriptional regulator [Streptomyces cyaneus] 8161.6e-110
WP_030419515.1 MULTISPECIES: CarD family transcriptional regulator [unclass... 8161.6e-110
WP_120722213.1 MULTISPECIES: CarD family transcriptional regulator [Strepto... 8161.8e-110
WP_007825257.1 CarD family transcriptional regulator [Streptomyces sp. Tu60... 8152.0e-110
WP_222975880.1 CarD family transcriptional regulator [Streptomyces sp. PTM0... 8152.1e-110
WP_010472787.1 MULTISPECIES: CarD family transcriptional regulator [Strepto... 8152.1e-110
WP_200304059.1 CarD family transcriptional regulator [Streptomyces adelaide... 8152.2e-110
WP_006380568.1 MULTISPECIES: CarD family transcriptional regulator [Strepto... 8152.4e-110

PSORT result

LocalizationCertaintyPSORT said
Not Clear