-- | --

IDSAM23877_3498 TypeCDS
From3720500 nt length504
To3719997 aa length167
Gene pI4.51
Definitionputative DNA-binding protein M.W (Da) 17714
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4012 putative DNA-binding protein2382.0e-82
coelSCO4198 putative DNA-binding protein2368.0e-82
sgrSGR_3987 putative DNA-binding protein1865.0e-62

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix13-6554.96.2e-15

HTH_311Helix-turn-helix domain9-6454.01.4e-14

HTH_191Helix-turn-helix domain10-6943.62.1e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053133257.1 helix-turn-helix domain-containing protein [Streptomyces amb... 7121.9e-94
WP_063482392.1 helix-turn-helix domain-containing protein [Streptomyces amb... 7043.1e-93
WP_121747742.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6689.3e-88
WP_210963595.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6634.3e-87
WP_043381952.1 helix-turn-helix domain-containing protein [Streptomyces mut... 6522.3e-85
WP_217167253.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6392.3e-83
PAK27868.1 transcriptional regulator [Streptomyces sp. alain-838] 6384.5e-83
WP_189234016.1 helix-turn-helix domain-containing protein [Streptomyces fla... 6364.8e-83
WP_164286320.1 helix-turn-helix domain-containing protein [Streptomyces roc... 6341.1e-82
WP_219187391.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6332.6e-82

PSORT result

LocalizationCertaintyPSORT said
Not Clear