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IDSAM23877_3528 TypeCDS
From3745181 nt length828
To3744354 aa length275
Gene pI5.12
DefinitionDNA-binding protein M.W (Da) 31004
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4050 putative DNA-binding protein3232.0e-112
coelSCO4176 conserved hypothetical protein1571.0e-47
sgrSGR_1602 putative DNA-binding protein1637.0e-50

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7142.65.1e-11

HTH_31Helix-turn-helix20-6833.52.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053133349.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14380.0e+00
WP_055596230.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12324.4e-170
WP_121747773.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12161.1e-167
WP_055628232.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11831.2e-162
WP_004986387.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11701.2e-160
WP_107102781.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11591.6e-158
WP_152775708.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11491.5e-157
WP_184824001.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11421.9e-156
WP_086876325.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 11412.8e-156
WP_102515021.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11413.0e-156

PSORT result

LocalizationCertaintyPSORT said
Not Clear