ID	SAM23877_3537	Type	CDS
From	3753857	nt length	543
To	3753315	aa length	180
Gene		pI	10.59
Definition	Sigma-70 family RNA polymerase sigma factor	M.W (Da)	19942
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	125-175	47.7	8.3e-13
	Sigma70_r2	1	Sigma-70 region 2	26-90	47.1	1.4e-12
	Sigma70_r4	1	Sigma-70, region 4	128-177	34.8	7.7e-09
	Sigma70_ECF	1	ECF sigma factor	16-179	23.6	3.7e-05

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_063482414.1	RNA polymerase sigma factor [Streptomyces ambofaciens] >gb	724	7.8e-96
WP_053133377.1	RNA polymerase sigma factor [Streptomyces ambofaciens] >gb	724	8.8e-96
WP_100048795.1	RNA polymerase sigma factor [Streptomyces sp. Alain-F2R5] >g...	699	4.2e-92
WP_107476128.1	RNA polymerase sigma factor [Streptomyces sp. AC542_RSS864] ...	699	4.6e-92
WP_217245242.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	699	5.6e-92
WP_019326768.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >lc...	696	1.3e-91
WP_189871570.1	RNA polymerase sigma factor [Streptomyces viridiviolaceus] >...	692	6.2e-91
WP_217140938.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	690	9.8e-91
MZD55625.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp. SID...	689	1.4e-90
WP_064728634.1	RNA polymerase sigma factor [Streptomyces parvulus] >gb	688	2.0e-90

PSORT result

Localization	Certainty	PSORT said
Not Clear

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