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IDSAM23877_3897 TypeCDS
From4155364 nt length204
To4155567 aa length67
GenecspD pI4.82
Definitioncold shock protein-like protein M.W (Da) 7189
NoteEvidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1622933%2C 21160192%2C 2186030%2C 9868784%3B Product type f : factor AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4447 putative cold shock protein1321.0e-43
coelSCO3748 f40 cold shock protein1372.0e-45
sgrSGR_5495 putative cold shock protein1293.0e-42

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65105.67.9e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_087808264.1 cold-shock protein [Streptomyces sp. CS113] >gb 3469.7e-42
WP_003975194.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3451.1e-41
WP_189869453.1 cold-shock protein [Streptomyces viridiviolaceus] >dbj 3423.3e-41
WP_121748131.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3414.8e-41
WP_067029156.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3381.4e-40
WP_217143806.1 cold shock domain-containing protein [Streptomyces sp. AC627... 3381.5e-40
GHD64728.1 cold-shock protein [Streptomyces goshikiensis] 3371.9e-40
WP_030228921.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3372.2e-40
WP_007268031.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3354.2e-40
WP_077060780.1 cold-shock protein [Streptomyces sp. MP131-18] >gb 3354.8e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear