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IDSAM23877_4116 TypeCDS
From4369045 nt length2193
To4366853 aa length730
Gene pI5.88
Definitionputative helicase M.W (Da) 78644
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4613 putative ATP-dependent RNA helicase13050.0e+00
coelSCO3550 putative helicase13790.0e+00
sgrSGR_3308 putative ATP-dependent RNA helicase12670.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase11-18689.22.4e-25

DUF19981Domain of unknown function (DUF1998)616-69573.61.5e-20

Helicase_C1Helicase conserved C-terminal domain245-35554.31.4e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ57161.1 putative helicase [Streptomyces ambofaciens ATCC 23877] 33180.0e+00
WP_053134744.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] 33090.0e+00
WP_063482645.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] >gb 32770.0e+00
GGY58353.1 helicase [Streptomyces geysiriensis] 32040.0e+00
GGQ30934.1 helicase [Streptomyces mutabilis] 31930.0e+00
WP_191887324.1 DEAD/DEAH box helicase [Streptomyces mutabilis] 31920.0e+00
WP_185927598.1 DEAD/DEAH box helicase [Streptomyces sp. WAC04189] 31910.0e+00
RSS03752.1 DEAD/DEAH box helicase [Streptomyces sp. WAC04189] 31910.0e+00
GHC01118.1 helicase [Streptomyces vinaceusdrappus] 31900.0e+00
WP_167469292.1 DEAD/DEAH box helicase [Streptomyces rubrogriseus] 31890.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear