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IDSAM23877_4493 TypeCDS
From4758847 nt length903
To4757945 aa length300
Gene pI8.50
DefinitionDNA-binding protein M.W (Da) 32613
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_655 putative DNA-binding protein2215.0e-72
coelSCO4680 putative DNA binding protein4658.0e-168

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain11-9062.04.7e-17

HTH_31Helix-turn-helix40-8629.93.8e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_174532298.1 helix-turn-helix domain-containing protein [Streptomyces amb... 13910.0e+00
ANB08000.1 XRE family transcriptional regulator [Streptomyces ambofaciens] 13570.0e+00
WP_179350209.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12861.8e-177
WP_193776457.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12825.3e-177
WP_210957950.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12764.7e-176
WP_225636243.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 12765.2e-176
WP_189229151.1 helix-turn-helix domain-containing protein [Streptomyces fla... 12765.9e-176
WP_199832340.1 helix-turn-helix domain-containing protein [Streptomyces pac... 12731.9e-175
WP_203613490.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12722.3e-175
WP_185931360.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12713.0e-175

PSORT result

LocalizationCertaintyPSORT said
Not Clear