-- | --

IDSAM23877_4553 TypeCDS
From4801581 nt length1251
To4802831 aa length416
Gene pI7.96
Definitionhypothetical protein M.W (Da) 45120
NoteEvidence 4 : Homologs of previously reported genes of unknown function AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4987 putative RNA polymerase ECF-subfamily sigma factor5620.0e+00
coelSCO4757 undefined product5930.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 216-7842.92.7e-11

Sigma70_r4_21Sigma-70, region 4117-16637.71.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053135705.1 sigma-70 family RNA polymerase sigma factor [Streptomyces am... 14740.0e+00
WP_063482853.1 sigma-70 family RNA polymerase sigma factor [Streptomyces am... 14600.0e+00
WP_210957903.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 14000.0e+00
WP_121748713.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 13950.0e+00
WP_161376409.1 MULTISPECIES: RNA polymerase sigma factor [unclassified Stre... 13730.0e+00
WP_055418323.1 RNA polymerase sigma factor [Streptomyces pactum] >gb 13730.0e+00
WP_217245447.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 13720.0e+00
WP_125492842.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 13720.0e+00
NEV88351.1 RNA polymerase sigma factor [Streptomyces tendae] 13720.0e+00
MZE69452.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp. SID... 13680.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear