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IDSAM23877_4713 TypeCDS
From4993874 nt length1785
To4995658 aa length594
Gene pI10.90
DefinitionHNH endonuclease domain protein M.W (Da) 67480
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_226 putative reverse transcriptase homolog; similar to GII intron6460.0e+00

*avm, Streptomyces avermitilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RVT_11Reverse transcriptase (RNA-dependent DNA polymerase)128-345135.91.3e-39

RVT_N1N-terminal domain of reverse transcriptase29-11099.77.7e-29

GIIM1Group II intron, maturase-specific domain361-43767.28.6e-19

HNH1HNH endonuclease548-58131.31.5e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ57758.1 HNH endonuclease domain protein [Streptomyces ambofaciens ATCC 23... 30870.0e+00
WP_053142750.1 group II intron reverse transcriptase/maturase [Streptomyces... 30680.0e+00
WP_141596213.1 group II intron reverse transcriptase/maturase [Streptomyces... 30460.0e+00
EKX63478.1 HNH endonuclease domain protein [Streptomyces ipomoeae 91-03] >gb... 30370.0e+00
WP_164411783.1 group II intron reverse transcriptase/maturase [Streptomyces... 30360.0e+00
WP_048820140.1 group II intron reverse transcriptase/maturase [Streptomyces... 30350.0e+00
WP_141584085.1 group II intron reverse transcriptase/maturase [Streptomyces... 30340.0e+00
WP_164250100.1 group II intron reverse transcriptase/maturase [Streptomyces... 30330.0e+00
GGZ04390.1 group II intron reverse transcriptase/maturase [Streptomyces oli... 29960.0e+00
WP_189817888.1 group II intron reverse transcriptase/maturase [Streptomyces... 29790.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear