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IDSAM23877_4717 TypeCDS
From4998669 nt length1014
To4997656 aa length337
GenesigG pI4.59
DefinitionECF RNA polymerase sigma factor SigG M.W (Da) 37085
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3363 putative RNA polymerase ECF-subfamily sigma factor5920.0e+00
coelSCO4895 putative ECF sigma factor6390.0e+00
sgrSGR_2646 putative RNA polymerase ECF-subfamily sigma factor5270.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 214-7772.81.3e-20

Sigma70_r4_21Sigma-70, region 4133-18656.81.1e-15

NTF21Nuclear transport factor 2 (NTF2) domain207-31534.62.1e-08

SnoaL_21SnoaL-like domain211-30532.59.7e-08

Sigma70_r41Sigma-70, region 4139-18626.43.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053136121.1 sigma-70 family RNA polymerase sigma factor [Streptomyces am... 16860.0e+00
WP_063482928.1 sigma-70 family RNA polymerase sigma factor [Streptomyces am... 16790.0e+00
WP_175461315.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 16260.0e+00
WP_019330087.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 16220.0e+00
WP_219182712.1 RNA polymerase subunit sigma-70 [Streptomyces sp. AC542_RSS8... 16200.0e+00
WP_220672104.1 RNA polymerase subunit sigma-70 [Streptomyces geysiriensis] ... 16160.0e+00
WP_192341415.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 16130.0e+00
WP_127438324.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 16120.0e+00
WP_043380666.1 sigma-70 family RNA polymerase sigma factor [Streptomyces mu... 16110.0e+00
WP_100046697.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 16100.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear