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IDSAM23877_4719 TypeCDS
From5000169 nt length981
To5001149 aa length326
GeneyybE pI8.78
Definitionputative HTH-type transcriptional regulator YybE M.W (Da) 35269
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3360 putative LysR-family transcriptional regulator5600.0e+00
coelSCO4897 putative transcriptional regulator5990.0e+00
sgrSGR_2643 putative LysR-family transcriptional regulator5110.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain119-319173.33.8e-51

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family36-9361.74.1e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ57764.1 putative HTH-type transcriptional regulator YybE [Streptomyces am... 14040.0e+00
TYP281... 13630.0e+00
WP_053136127.1 LysR family transcriptional regulator [Streptomyces ambofaci... 13550.0e+00
EHN76157.1 transcriptional regulator [Streptomyces coelicoflavus ZG0656] 13500.0e+00
GHC08068.1 transcriptional regulator [Streptomyces vinaceusdrappus] 13480.0e+00
PSK50651.1 HTH-type transcriptional regulator GltC [Streptomyces sp. 111WW2]... 13460.0e+00
TYP48204.1 t... 13450.0e+00
QUW93335.1 HTH-type transcriptional regulator GltC [Streptomyces sp. V17-9] 13420.0e+00
PPS84441.1 HTH-type transcriptional regulator GltC [Streptomyces sp. MH60] 13410.0e+00
GHA55994.1 transcriptional regulator [Streptomyces tendae] 13400.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear