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IDSAM23877_4766 TypeCDS
From5045490 nt length876
To5044615 aa length291
Gene pI9.35
DefinitionDNA-binding protein M.W (Da) 32894
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3315 putative DNA-binding protein4483.0e-161
coelSCO4944 putative DNA-binding protein5430.0e+00
sgrSGR_6891 putative transcriptional regulator4321.0e-154

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain10-9063.51.5e-17

HTH_31Helix-turn-helix40-8438.95.9e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053136246.1 helix-turn-helix domain-containing protein [Streptomyces amb... 13760.0e+00
WP_063482941.1 helix-turn-helix domain-containing protein [Streptomyces amb... 13700.0e+00
WP_055418158.1 helix-turn-helix domain-containing protein [Streptomyces pac... 13300.0e+00
WP_121748876.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13280.0e+00
WP_210957739.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13230.0e+00
WP_191884575.1 helix-turn-helix domain-containing protein [Streptomyces mut... 13200.0e+00
KFG74006.1 XRE family transcriptional regulator [Streptomyces mutabilis] 13190.0e+00
WP_052412270.1 helix-turn-helix domain-containing protein [Streptomyces mut... 13180.0e+00
WP_087789722.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13110.0e+00
WP_076975993.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13110.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear