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IDSAM23877_4806 TypeCDS
From5091309 nt length1575
To5092883 aa length524
Gene pI5.01
DefinitionPolysaccharide lyase M.W (Da) 54201
Note AseI frg.
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6378 putative secreted pectate lyase1171.0e-29
coelSCO7228 putative polysaccharide lyase.7970.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CBM_61Carbohydrate binding module (family 6)50-15443.92.3e-11

CBM_351Carbohydrate binding module (family 35)30-15441.31.5e-10

Beta_helix1Right handed beta helix region254-44432.65.7e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053136368.1 carbohydrate-binding protein [Streptomyces ambofaciens] >gb 26460.0e+00
WP_063482956.1 carbohydrate-binding protein [Streptomyces ambofaciens] >gb 26380.0e+00
WP_216882592.1 MULTISPECIES: carbohydrate-binding protein [unclassified Str... 24110.0e+00
WP_019329159.1 MULTISPECIES: carbohydrate-binding protein [unclassified Str... 24050.0e+00
WP_127436649.1 carbohydrate-binding protein [Streptomyces sp. WAC05458] >gb... 24040.0e+00
WP_030969410.1 MULTISPECIES: carbohydrate-binding protein [Streptomyces] >g... 24040.0e+00
WP_193515763.1 carbohydrate-binding protein [Streptomyces vinaceusdrappus] ... 24030.0e+00
WP_136236105.1 carbohydrate-binding protein [Streptomyces sp. SS52] >gb 24030.0e+00
WP_046248194.1 MULTISPECIES: carbohydrate-binding protein [unclassified Str... 24000.0e+00
WP_220671918.1 carbohydrate-binding protein [Streptomyces geysiriensis] >lc... 23990.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear