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IDSAM23877_4999 TypeCDS
From5302170 nt length1014
To5301157 aa length337
GenersgA pI7.06
Definitionputative ribosome biogenesis GTPase RsgA M.W (Da) 36710
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3043 hypothetical protein5860.0e+00
coelSCO5211 conserved hypothetical protein6540.0e+00
sgrSGR_2311 conserved hypothetical protein5460.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF2581Protein of unknown function, DUF25895-272141.52.1e-41

MMR_HSR1150S ribosome-binding GTPase206-26827.81.9e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053136845.1 ribosome small subunit-dependent GTPase A [Streptomyces ambo... 16490.0e+00
WP_063483040.1 ribosome small subunit-dependent GTPase A [Streptomyces ambo... 16480.0e+00
WP_210960554.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16210.0e+00
WP_121749127.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16180.0e+00
WP_109033336.1 ribosome small subunit-dependent GTPase A [Streptomyces rubr... 16070.0e+00
WP_121714756.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16070.0e+00
WP_073724349.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16060.0e+00
WP_219182368.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16050.0e+00
WP_061442634.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16050.0e+00
WP_217246512.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 16040.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear