ID	SAM23877_5004	Type	CDS
From	5306043	nt length	912
To	5306954	aa length	303
Gene		pI	5.26
Definition	RNA polymerase sigma factor	M.W (Da)	32746
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	119-182	65.0	3.5e-18
	Sigma70_r4_2	1	Sigma-70, region 4	224-274	51.2	6.6e-14
	Sigma70_r4	1	Sigma-70, region 4	227-275	33.8	1.6e-08

BLAST search result (top 10 hits)

ID	Description	Score	E-value
AKZ58049.1	RNA polymerase sigma factor [Streptomyces ambofaciens ATCC 23877]	1594	0.0e+00
NEC73614.1	sigma-70 family RNA polymerase sigma factor [Streptomyces rochei]...	1447	0.0e+00
WP_164143036.1	sigma-70 family RNA polymerase sigma factor [Streptomyces co...	1443	0.0e+00
NUV91699.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp. KAI...	1443	0.0e+00
QNF64536.1	RNA polymerase subunit sigma [Streptomyces sp. Ae707_A7]	1442	0.0e+00
QIP72564.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp. VN1...	1441	0.0e+00
RSS69591.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp. WAC...	1439	0.0e+00
WP_164383290.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	1438	0.0e+00
PPS85305.1	ECF RNA polymerase sigma factor SigR [Streptomyces sp. MH60]	1436	0.0e+00
GGQ51196.1	ECF RNA polymerase sigma factor SigR [Streptomyces flaveolus]	1433	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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