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IDSAM23877_5012 TypeCDS
From5315740 nt length969
To5314772 aa length322
Gene pI6.19
DefinitionAraC family transcription regulator M.W (Da) 35486
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3030 putative AraC-family transcriptional regulator5550.0e+00
coelSCO5224 putative araC-family transcriptional regulator6060.0e+00
sgrSGR_2301 putative AdpA-family transcriptional regulator5110.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain235-31374.74.6e-21

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family222-26252.72.7e-14

DJ-1_PfpI1DJ-1/PfpI family8-17453.03e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053136878.1 helix-turn-helix domain-containing protein [Streptomyces amb... 16090.0e+00
WP_063483046.1 helix-turn-helix domain-containing protein [Streptomyces amb... 16030.0e+00
WP_030145939.1 helix-turn-helix domain-containing protein [Streptomyces vio... 15220.0e+00
WP_055417929.1 helix-turn-helix domain-containing protein [Streptomyces pac... 15190.0e+00
WP_153178030.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 15160.0e+00
WP_127893037.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 15150.0e+00
WP_064729755.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 15140.0e+00
WP_007444558.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 15140.0e+00
WP_164458709.1 helix-turn-helix domain-containing protein [Streptomyces ten... 15120.0e+00
WP_161329953.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15120.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear