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IDSAM23877_5029 TypeCDS
From5333629 nt length258
To5333372 aa length85
GenewhiB pI7.94
DefinitionTranscriptional regulator WhiB1 M.W (Da) 9700
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3016 putative WhiB-family transcriptional regulator; putative role in cell cycle control1405.0e-46
coelSCO5240 putative WhiB-family transcriptional regulator1742.0e-59
sgrSGR_2274 putative WhiB-family transcriptional regulator1403.0e-46

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Whib1Transcription factor WhiB3-7196.87.4e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AJC56053.1 WhiB family transcriptional regulator [Streptomyces sp. 769] 3613.4e-43
AJT64480.3 Transcriptional regulator WhiB1 [Streptomyces lydicus] 3603.8e-43
WP_003983230.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 3575.3e-43
WP_211039019.1 WhiB family transcriptional regulator [Streptomyces tardus] ... 3575.4e-43
WP_003973730.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 3575.8e-43
GGO85602.1 hypothetical protein GCM10012280_19760 [Streptomyces tyrosinilyt... 3571.2e-42
WP_031520293.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 3551.4e-42
WP_189131180.1 WhiB family transcriptional regulator [Streptomyces tyrosini... 3551.5e-42
WP_138350912.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 3541.7e-42
3541.8e-42

PSORT result

LocalizationCertaintyPSORT said
Not Clear