-- | --

IDSAM23877_5051 TypeCDS
From5353440 nt length258
To5353697 aa length85
Gene pI9.93
Definitionhypothetical protein M.W (Da) 9631
NoteEvidence 4 : Homologs of previously reported genes of unknown function AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2979 hypothetical protein1251.0e-40
sgrSGR_2232 conserved hypothetical protein1267.0e-41

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_111HTH domain54-8024.32.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ58096.1 hypothetical protein SAM23877_5051 [Streptomyces ambofaciens ATCC... 3351.7e-39
GHG42844.1 HTH domain-containing protein [Streptomyces hydrogenans] >dbj 2718.5e-30
GHK00984.1 hypothetical protein SY2F82_27810 [Streptomyces sp. Y2F8-2] 2641.0e-28
GHB41967.1 HTH domain-containing protein [Streptomyces viridiviolaceus] 2594.3e-28
2594.5e-28
GGQ26345.1 HTH domain-containing protein [Streptomyces mutabilis] 2588.3e-28
EHN75881.1 hypothetical protein SMCF_4669 [Streptomyces coelicoflavus ZG0656... 2578.5e-28
ROQ35425.1 HTH domain-containing protein [Streptomyces sp. PanSC19] 2579.3e-28
GGT07352.1 HTH domain-containing protein [Streptomyces atratus] 2543.0e-27
SBV04305.1 Sigma-70, region 4 [Streptomyces sp. OspMP-M45] >emb 2543.8e-27

PSORT result

LocalizationCertaintyPSORT said
Not Clear