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IDSAM23877_5078 TypeCDS
From5385030 nt length1245
To5383786 aa length414
GenecseC pI10.44
DefinitionSensor protein CseC M.W (Da) 43890
Note AseI frg.
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2950 putative two-component system sensor kinase5950.0e+00
coelSCO5304 putative sensor-like histidine kinase6960.0e+00
sgrSGR_2200 putative two-component system sensor kinase5061.0e-179

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HAMP1HAMP domain138-21249.53.3e-13

HisKA1His Kinase A (phospho-acceptor) domain218-27547.01.7e-12

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase313-41342.38.1e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_063483076.1 HAMP domain-containing histidine kinase [Streptomyces ambofa... 18100.0e+00
WP_053137039.1 HAMP domain-containing histidine kinase [Streptomyces ambofa... 18080.0e+00
WP_073724218.1 HAMP domain-containing protein [Streptomyces sp. CB02414] >g... 16170.0e+00
WP_121749186.1 HAMP domain-containing protein [Streptomyces sp. E2N166] 16110.0e+00
WP_217246448.1 HAMP domain-containing protein [Streptomyces sp. AC602_WCS93... 16090.0e+00
PAK24640.1 two-component sensor histidine kinase [Streptomyces sp. alain-838... 15870.0e+00
WP_100046667.1 HAMP domain-containing histidine kinase [Streptomyces sp. Al... 15850.0e+00
WP_225636053.1 MULTISPECIES: HAMP domain-containing protein [unclassified S... 15830.0e+00
WP_122616207.1 HAMP domain-containing histidine kinase [Streptomyces sp. Tu... 15820.0e+00
WP_210960486.1 HAMP domain-containing histidine kinase [Streptomyces sp. b9... 15810.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear