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IDSAM23877_5081 TypeCDS
From5387615 nt length882
To5386734 aa length293
GenepolK pI8.11
DefinitionDNA polymerase LigD%2C polymerase domain-containing protein M.W (Da) 32174
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2946 putative DNA ligase4642.0e-167
coelSCO5308 hypothetical protein5420.0e+00
sgrSGR_2196 conserved hypothetical protein4052.0e-144

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137048.1 non-homologous end-joining DNA ligase [Streptomyces ambofaci... 15190.0e+00
WP_063483078.1 non-homologous end-joining DNA ligase [Streptomyces ambofaci... 15130.0e+00
WP_134653690.1 MULTISPECIES: non-homologous end-joining DNA ligase [unclass... 14350.0e+00
WP_087789543.1 non-homologous end-joining DNA ligase [Streptomyces sp. CS15... 14340.0e+00
WP_061442555.1 non-homologous end-joining DNA ligase [Streptomyces sp. CCM_... 14340.0e+00
WP_042825168.1 MULTISPECIES: non-homologous end-joining DNA ligase [Strepto... 14330.0e+00
WP_164419759.1 non-homologous end-joining DNA ligase [Streptomyces coelicof... 14330.0e+00
WP_210960482.1 non-homologous end-joining DNA ligase [Streptomyces sp. b94]... 14320.0e+00
WP_102928125.1 non-homologous end-joining DNA ligase [Streptomyces diastati... 14320.0e+00
WP_054099037.1 non-homologous end-joining DNA ligase [Streptomyces coelicof... 14310.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear