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IDSAM23877_5241 TypeCDS
From5564154 nt length540
To5564693 aa length179
Gene pI4.42
DefinitionLysine decarboxylase M.W (Da) 19435
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2751 hypothetical protein3297.0e-118
coelSCO5491 undefined product3483.0e-125
sgrSGR_2024 conserved hypothetical protein3061.0e-108

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Lysine_decarbox1Possible lysine decarboxylase44-171112.01.9e-32

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137437.1 TIGR00730 family Rossman fold protein [Streptomyces ambofaci... 9163.9e-125
WP_063483154.1 TIGR00730 family Rossman fold protein [Streptomyces ambofaci... 9061.5e-123
WP_159329470.1 TIGR00730 family Rossman fold protein [Streptomyces tendae] 9051.9e-123
WP_127896272.1 MULTISPECIES: TIGR00730 family Rossman fold protein [Strepto... 9025.3e-123
WP_226028337.1 TIGR00730 family Rossman fold protein [Streptomyces hyderaba... 9016.9e-123
MYS71604.1 TIGR00730 family Rossman fold protein [Streptomyces sp. SID5926] 9009.3e-123
WP_030402400.1 MULTISPECIES: TIGR00730 family Rossman fold protein [Strepto... 8982.4e-122
WP_054102030.1 MULTISPECIES: TIGR00730 family Rossman fold protein [Strepto... 8972.8e-122
WP_055421834.1 TIGR00730 family Rossman fold protein [Streptomyces pactum] ... 8972.9e-122
WP_210984976.1 TIGR00730 family Rossman fold protein [Streptomyces sp. RK76... 8972.9e-122

PSORT result

LocalizationCertaintyPSORT said
Not Clear