-- | --

IDSAM23877_5255 TypeCDS
From5579141 nt length3234
To5582374 aa length1077
Gene pI5.85
Definitionputative regulatory protein M.W (Da) 115233
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2739 putative LuxR-family transcriptional regulator14320.0e+00
coelSCO5506 putative regulatory protein16680.0e+00
sgrSGR_2009 putative LuxR-family transcriptional regulator11230.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_161AAA ATPase domain50-23399.32.7e-28

GerE1Bacterial regulatory proteins, luxR family1006-106068.03.5e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ58300.1 putative regulatory protein [Streptomyces ambofaciens ATCC 23877] 43080.0e+00
WP_053137470.1 LuxR family transcriptional regulator [Streptomyces ambofaci... 41260.0e+00
WP_063483160.1 LuxR family transcriptional regulator [Streptomyces ambofaci... 41120.0e+00
AQS67403.1 hypothetical protein B1H29_11105 [Streptomyces pactum] 38690.0e+00
WP_055421942.1 AAA family ATPase [Streptomyces pactum] 37980.0e+00
QUW93966.1 Transcriptional regulatory protein LiaR [Streptomyces sp. V17-9] 37740.0e+00
GGZ82410.1 helix-turn-helix transcriptional regulator [Streptomyces plicatu... 37600.0e+00
GHB10749.1 helix-turn-helix transcriptional regulator [Streptomyces tendae] 37600.0e+00
RSS16233.1 helix-turn-helix transcriptional regulator [Streptomyces sp. WAC0... 37520.0e+00
QCR49702.1 hypothetical protein C1N79_25500 [Streptomyces sp. SGAir0924] >db... 37470.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear