-- | --

IDSAM23877_5268 TypeCDS
From5598454 nt length1215
To5597240 aa length404
Gene pI6.80
Definitionputative transcriptional regulator M.W (Da) 42931
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2725 putative transcriptional regulator5830.0e+00
coelSCO5518 putative transcriptional regulator6600.0e+00
sgrSGR_1990 putative transcriptional regulator4391.0e-154

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain343-40180.84e-23

HTH_81Bacterial regulatory protein, Fis family358-37722.85.5e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137499.1 helix-turn-helix domain-containing protein [Streptomyces amb... 15670.0e+00
WP_063483166.1 helix-turn-helix domain-containing protein [Streptomyces amb... 15600.0e+00
WP_076976459.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 14440.0e+00
WP_059302309.1 helix-turn-helix domain-containing protein [Streptomyces can... 14380.0e+00
WP_161331208.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14360.0e+00
WP_121701506.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14350.0e+00
WP_210960246.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14340.0e+00
WP_122617630.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14280.0e+00
WP_217141798.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14210.0e+00
QNF64781.1 PucR family transcriptional regulator [Streptomyces sp. Ae707_A7] 14080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear