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IDSAM23877_5385 TypeCDS
From5720624 nt length516
To5720109 aa length171
Gene pI4.88
Definitionputative HTH-type transcriptional regulator M.W (Da) 18824
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2611 putative AsnC-family transcriptional regulator3083.0e-110
coelSCO5656 transcriptional regulatoty protein3302.0e-118
sgrSGR_1846 putative AsnC-family transcriptional regulator2909.0e-103

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain91-16059.02.9e-16

HTH_AsnC-type1AsnC-type helix-turn-helix domain26-6657.29.5e-16

HTH_241Winged helix-turn-helix DNA-binding26-7138.84.6e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137793.1 Lrp/AsnC family transcriptional regulator [Streptomyces ambo... 8911.1e-121
WP_086558519.1 Lrp/AsnC family transcriptional regulator [Streptomyces afri... 8814.8e-120
WP_010044422.1 Lrp/AsnC family transcriptional regulator [Streptomyces char... 8815.2e-120
WP_052838356.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 8781.3e-119
WP_064730063.1 Lrp/AsnC family transcriptional regulator [Streptomyces parv... 8781.4e-119
WP_190201654.1 Lrp/AsnC family transcriptional regulator [Streptomyces djak... 8772.0e-119
WP_039933764.1 Lrp/AsnC family transcriptional regulator [Streptomyces viri... 8762.1e-119
WP_133889441.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 8762.7e-119
WP_030402280.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 8762.8e-119
WP_122615146.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [unc... 8762.9e-119

PSORT result

LocalizationCertaintyPSORT said
Not Clear