-- | --

IDSAM23877_5430 TypeCDS
From5778666 nt length906
To5779571 aa length301
GenetruB pI6.69
DefinitiontRNA pseudouridine synthase B M.W (Da) 32073
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2548 putative tRNA pseudouridine synthase5420.0e+00
coelSCO5709 probable tRNA pseudouridine synthase5450.0e+00
sgrSGR_1808 putative tRNA pseudouridine synthase4951.0e-179

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TruB_N1TruB family pseudouridylate synthase (N terminal domain)31-187164.22.3e-48

TruB_C1tRNA Pseudouridine synthase II, C terminal243-30064.07.1e-18

TruB_C_21tRNA pseudouridylate synthase B C-terminal domain188-22950.91.2e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053137926.1 tRNA pseudouridine(55) synthase TruB [Streptomyces ambofacie... 14110.0e+00
WP_043379251.1 tRNA pseudouridine(55) synthase TruB [Streptomyces mutabilis... 13270.0e+00
WP_100047835.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. Alain... 13250.0e+00
WP_191889171.1 tRNA pseudouridine(55) synthase TruB [Streptomyces mutabilis... 13250.0e+00
PAK22575.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. alain-838] 13250.0e+00
WP_219184846.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. AC542... 13220.0e+00
WP_055421667.1 tRNA pseudouridine(55) synthase TruB [Streptomyces pactum] >... 13150.0e+00
WP_030619076.1 tRNA pseudouridine(55) synthase TruB [Streptomyces achromoge... 13150.0e+00
WP_108990267.1 tRNA pseudouridine(55) synthase TruB [Streptomyces coelicofl... 13120.0e+00
WP_189997541.1 tRNA pseudouridine(55) synthase TruB [Streptomyces achromoge... 13120.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear