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IDSAM23877_5970 TypeCDS
From6466143 nt length804
To6465340 aa length267
GeneiclR pI6.14
DefinitionDNA-binding transcriptional repressor M.W (Da) 28112
NoteEvidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1995429%2C 1995431%2C 2185227%3B Product type r : regulator AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1997 putative IclR-family transcriptional regulator4801.0e-174
coelSCO6246 putative transcriptional regulator5120.0e+00
sgrSGR_1290 putative IclR-family transcriptional regulator4679.0e-170

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IclR1Bacterial transcriptional regulator134-256104.23.8e-30

HTH_IclR1IclR helix-turn-helix domain21-7265.52.4e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139235.1 allantoin degradation transcriptional regulator AllR [Strept... 12122.1e-167
WP_121749919.1 MULTISPECIES: allantoin degradation transcriptional regulato... 11991.9e-165
WP_055419439.1 allantoin degradation transcriptional regulator AllR [Strept... 11941.2e-164
WP_125493628.1 allantoin degradation transcriptional regulator AllR [Strept... 11941.4e-164
WP_191885680.1 allantoin degradation transcriptional regulator AllR [Strept... 11931.7e-164
WP_064730515.1 allantoin degradation transcriptional regulator AllR [Strept... 11932.1e-164
WP_043378223.1 allantoin degradation transcriptional regulator AllR [Strept... 11904.7e-164
WP_100049535.1 allantoin degradation transcriptional regulator AllR [Strept... 11897.7e-164
MZE68054.1 allantoin degradation transcriptional regulator AllR [Streptomyce... 11881.0e-163
WP_217143204.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11862.0e-163

PSORT result

LocalizationCertaintyPSORT said
Not Clear