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IDSAM23877_6023 TypeCDS
From6522483 nt length2532
To6519952 aa length843
GeneclpC pI5.05
DefinitionATP-dependent Clp protease ATP-binding subunit ClpC M.W (Da) 92068
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6408 clp protease ATP binding subunit15360.0e+00
sgrSGR_6454 putative chaperone8750.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)565-738181.01.9e-53

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein744-82491.52.4e-26

AAA2ATPase family associated with various cellular activities (AAA)233-365, 571-68981.37.3e-23

Clp_N2Clp amino terminal domain, pathogenicity island component46-95, 124-16475.32.7e-21

AAA_51AAA domain (dynein-related subfamily)570-68963.32.1e-17

Sigma54_activat1Sigma-54 interaction domain569-67139.54.1e-10

UVR1UvrB/uvrC motif447-48137.98.8e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139313.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 40990.0e+00
WP_219179096.1 AAA family ATPase [Streptomyces sp. AC542_RSS864] 39420.0e+00
WP_055419416.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 39400.0e+00
WP_121749974.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 39370.0e+00
OSC70006.1 AAA family ATPase [Streptomyces sp. 4F] 39310.0e+00
WP_019328579.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 39230.0e+00
WP_210901381.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 39230.0e+00
WP_114530908.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 39210.0e+00
WP_125768783.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 39200.0e+00
WP_189232243.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 39190.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear