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IDSAM23877_6026 TypeCDS
From6523856 nt length264
To6524119 aa length87
Gene pI9.79
Definitionhypothetical protein M.W (Da) 9204
NoteEvidence 4 : Homologs of previously reported genes of unknown function AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1955 putative DNA-binding protein1352.0e-44
coelSCO6410 hypothetical protein1276.0e-41
sgrSGR_1236 putative DNA-binding protein1241.0e-39

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7348.85.8e-13

HTH_31Helix-turn-helix21-7439.05.7e-10

HTH_261Cro/C1-type HTH DNA-binding domain29-7526.94.2e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139317.1 helix-turn-helix domain-containing protein [Streptomyces amb... 3031.4e-34
WP_187824125.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 2726.7e-30
WP_089107729.1 helix-turn-helix domain-containing protein [Streptomyces hya... 2631.3e-28
WP_150944280.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 2631.7e-28
WP_217547946.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 2612.8e-28
WP_189266548.1 helix-turn-helix domain-containing protein [Streptomyces fus... 2613.1e-28
WP_189288319.1 helix-turn-helix domain-containing protein [Streptomyces fum... 2604.0e-28
WP_124438043.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 2604.6e-28
WP_161065198.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 2595.7e-28
WP_093498176.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 2596.0e-28

PSORT result

LocalizationCertaintyPSORT said
Not Clear