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IDSAM23877_6055 TypeCDS
From6559453 nt length1497
To6560949 aa length498
GenealkA pI9.36
Definitionputative bifunctional transcriptional activator/DNA repair enzyme AlkA M.W (Da) 53892
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1934 putative ADA-like regulatory protein8250.0e+00
coelSCO6461 putative ADA-like regulatory protein8410.0e+00
sgrSGR_1201 putative ADA-like transcriptional regulator7490.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AlkA_N1AlkA N-terminal domain209-323109.11.3e-31

Ada_Zn_binding1Metal binding domain of Ada12-7592.41.2e-26

HTH_181Helix-turn-helix domain110-18963.91.1e-17

HhH-GPD1HhH-GPD superfamily base excision DNA repair protein329-47832.01.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ59100.1 putative bifunctional transcriptional activator/DNA repair enzyme... 20820.0e+00
WP_053139363.1 helix-turn-helix domain-containing protein [Streptomyces amb... 20580.0e+00
WP_063483562.1 helix-turn-helix domain-containing protein [Streptomyces amb... 20330.0e+00
GGQ14840.1 DNA-3-methyladenine glycosylase [Streptomyces mutabilis] 19680.0e+00
QUW94827.1 putative bifunctional transcriptional activator/DNA repair enzyme... 19530.0e+00
WP_191885861.1 DNA-3-methyladenine glycosylase 2 [Streptomyces mutabilis] 19440.0e+00
19370.0e+00
WP_095751197.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19360.0e+00
WP_212732554.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19310.0e+00
AYC37537.1 putative bifunctional transcriptional activator/DNA repair enzyme... 19290.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear