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IDSAM23877_6224 TypeCDS
From6686325 nt length429
To6686753 aa length142
Gene pI9.75
DefinitionTranscriptional regulator M.W (Da) 15582
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3000 putative AraC-family transcriptional regulator2107.0e-72
coelSCO6518 putative transcriptional regulator2587.0e-91
sgrSGR_4771 putative AraC-family transcriptional regulator2024.0e-69

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain30-10979.12e-22

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family72-10754.01.1e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ59269.1 Transcriptional regulator [Streptomyces ambofaciens ATCC 23877] >... 6281.7e-82
WP_201258974.1 helix-turn-helix transcriptional regulator [Streptomyces amb... 6262.0e-82
WP_121750053.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6049.1e-79
WP_122618953.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5952.4e-77
WP_125490675.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5942.7e-77
WP_210962426.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5943.0e-77
MZE72469.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 5933.8e-77
WP_217145035.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5924.6e-77
WP_114530813.1 helix-turn-helix transcriptional regulator [Streptomyces par... 5934.6e-77
WP_202558486.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5915.3e-77

PSORT result

LocalizationCertaintyPSORT said
Not Clear