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IDSAM23877_6244 TypeCDS
From6710293 nt length816
To6709478 aa length271
Gene pI6.43
Definitionhypothetical protein M.W (Da) 30077
NoteEvidence 4 : Homologs of previously reported genes of unknown function AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1860 putative DNA-binding protein4436.0e-160
coelSCO6539 hypothetical protein4713.0e-171
sgrSGR_1133 putative DNA-binding protein3652.0e-129

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7651.11.1e-13

HTH_31Helix-turn-helix19-7240.51.9e-10

HTH_191Helix-turn-helix domain18-7131.01.8e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139670.1 helix-turn-helix transcriptional regulator [Streptomyces amb... 13790.0e+00
WP_063483592.1 helix-turn-helix domain-containing protein [Streptomyces amb... 13730.0e+00
WP_121750081.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13011.0e-180
WP_210961147.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12958.1e-180
WP_030968978.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 12861.7e-178
WP_019328692.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 12852.5e-178
WP_199577519.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12852.6e-178
WP_100045230.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12843.3e-178
WP_073730619.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12834.3e-178
WP_046248735.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 12791.7e-177

PSORT result

LocalizationCertaintyPSORT said
Not Clear