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IDSAM23877_6265 TypeCDS
From6737455 nt length1020
To6738474 aa length339
GenerbsC pI9.23
DefinitionRibose transport system permease protein RbsC M.W (Da) 35028
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1827 putative simple sugar ABC transporter permease protein5160.0e+00
coelSCO6568 ABC transporter integral membrane protein5830.0e+00
sgrSGR_1117 putative ABC transporter permease protein5011.0e-180

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_21Branched-chain amino acid transport system / permease component63-329146.57.2e-43

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139713.1 ABC transporter permease [Streptomyces ambofaciens] >gb 13098.4e-180
WP_100048065.1 ABC transporter permease [Streptomyces sp. Alain-F2R5] >gb 13029.3e-179
WP_043377800.1 ABC transporter permease [Streptomyces mutabilis] >gb 12992.8e-178
WP_019328717.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 12992.8e-178
WP_055419276.1 ABC transporter permease [Streptomyces pactum] >gb 12993.1e-178
WP_062134884.1 ABC transporter permease [Streptomyces sp. CC71] >gb 12968.8e-178
WP_219179212.1 ABC transporter permease [Streptomyces sp. AC542_RSS864] 12951.1e-177
WP_121750105.1 ABC transporter permease [Streptomyces sp. E2N166] 12951.2e-177
WP_210961131.1 ABC transporter permease [Streptomyces sp. b94] >lcl 12951.2e-177
WP_127443496.1 ABC transporter permease [Streptomyces sp. WAC08452] >gb 12951.4e-177

PSORT result

LocalizationCertaintyPSORT said
Not Clear