-- | --

IDSAM23877_6299 TypeCDS
From6783955 nt length1794
To6785748 aa length597
Gene pI11.77
Definitionputative transport system permease protein M.W (Da) 60554
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6645 putative transport system permease protein7510.0e+00
sgrSGR_4016 putative ABC transporter permease protein3892.0e-129

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_12Binding-protein-dependent transport system inner membrane component141-304, 400-572104.16.4e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139773.1 ABC transporter permease subunit [Streptomyces ambofaciens] ... 14290.0e+00
WP_063483623.1 ABC transporter permease subunit [Streptomyces ambofaciens] ... 14130.0e+00
RIH... 13262.7e-174
WP_137961869.1 ABC transporter permease subunit [Streptomyces sp. SGAir0924... 13221.0e-173
WP_127432098.1 ABC transporter permease subunit [Streptomyces sp. WAC08401]... 13211.3e-173
WP_086875976.1 ABC transporter permease subunit [Streptomyces sp. RT42] >lc... 13211.7e-173
WP_210901240.1 ABC transporter permease subunit [Streptomyces sp. RM99] >lc... 13211.7e-173
WP_062134992.1 MULTISPECIES: ABC transporter permease subunit [unclassified... 13193.0e-173
NUV93673.1 ABC transporter permease subunit [Streptomyces sp. KAI 90] 13183.7e-173
WP_223780867.1 ABC transporter permease subunit [Streptomyces sp. A144] >lc... 13184.1e-173

PSORT result

LocalizationCertaintyPSORT said
Not Clear