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IDSAM23877_6361 TypeCDS
From6856335 nt length1068
To6855268 aa length355
GeneligC pI6.45
DefinitionDNA ligase C2 M.W (Da) 40038
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1697 putative DNA ligase6280.0e+00
coelSCO6707 putative DNA ligase6240.0e+00
sgrSGR_1024 putative DNA ligase5170.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_A_M1ATP dependent DNA ligase domain11-197136.39.4e-40

DNA_ligase_A_C1ATP dependent DNA ligase C terminal region215-33061.48.9e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053139881.1 ATP-dependent DNA ligase [Streptomyces ambofaciens] >gb 16020.0e+00
WP_063483655.1 ATP-dependent DNA ligase [Streptomyces ambofaciens] >gb 15960.0e+00
WP_073728050.1 ATP-dependent DNA ligase [Streptomyces sp. CB02414] >gb 15310.0e+00
PAK26791.1 ATP-dependent DNA ligase [Streptomyces sp. alain-838] 15210.0e+00
WP_189231663.1 ATP-dependent DNA ligase [Streptomyces flaveolus] >dbj 15190.0e+00
WP_193515928.1 ATP-dependent DNA ligase [Streptomyces vinaceusdrappus] >dbj... 15190.0e+00
WP_217254080.1 ATP-dependent DNA ligase [Streptomyces sp. AC602_WCS936] 15190.0e+00
WP_031020365.1 MULTISPECIES: ATP-dependent DNA ligase [Streptomyces] >lcl 15170.0e+00
WP_164288662.1 MULTISPECIES: ATP-dependent DNA ligase [Streptomyces rochei ... 15150.0e+00
WP_109204075.1 MULTISPECIES: ATP-dependent DNA ligase [unclassified Strepto... 15140.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear