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IDSAM23877_6436 TypeCDS
From6938087 nt length903
To6938989 aa length300
Gene pI5.56
Definitionputative LysR-family transcriptional regulator M.W (Da) 31450
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1626 putative LysR-family transcriptional regulator5180.0e+00
coelSCO6801 putative LysR-family transcriptional regulator5480.0e+00
sgrSGR_1442 putative LysR-family transcriptional regulator4693.0e-169

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain89-298133.36.7e-39

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6370.57.5e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053140021.1 LysR family transcriptional regulator [Streptomyces ambofaci... 12773.9e-176
WP_125495095.1 LysR family transcriptional regulator [Streptomyces sp. WAC ... 12541.2e-172
MZE75167.1 LysR family transcriptional regulator [Streptomyces sp. SID5789] 12504.8e-172
WP_210964403.1 LysR family transcriptional regulator [Streptomyces sp. b94]... 12461.8e-171
WP_219185796.1 LysR family transcriptional regulator [Streptomyces sp. AC54... 12453.1e-171
WP_019330490.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12443.6e-171
WP_086875836.1 LysR family transcriptional regulator [Streptomyces sp. RT42... 12435.0e-171
WP_127432141.1 LysR family transcriptional regulator [Streptomyces sp. WAC0... 12411.1e-170
WP_055419104.1 LysR family transcriptional regulator [Streptomyces pactum] ... 12401.5e-170
WP_216882971.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 12401.7e-170

PSORT result

LocalizationCertaintyPSORT said
Not Clear